How to switch SATA controller driver from RAID to AHCI on Windows 10 without a reinstall

   Sam Nicholls    No Comments yet    System Administration

I was bemused to find a Linux live disk unable to identify the storage volume on my new Dell XPS 13 laptop. It seemed I needed to change the SATA controller mode from `RAID` to `AHCI`, but Windows had other ideas. Unable to find a solution online that didn’t cause a boot BSOD, I found my own.

Duplicate definition error with GATK PrintReads and MalformedReadFilter

   Sam Nicholls    One Comment    Tools

This afternoon I wanted to quickly check whether some reads in a BAM would be filtered out by the GATK `MalformedReadFilter`. Turns out that GATK is pretty unforgiving if you forget that filter is automatically applied by `PrintReads`.